Valliappan Kannappan

Episode 5: Beyond Bias: Toward Chiral Intelligence

âť“ Can AI truly be intelligent if it is stereo-blind? 🌀 On Visuals and Stereochemical TruthSome illustrations in this series are generated or assisted by AI to support conceptual understanding. These visuals are intentionally simplified and should not be read as stereochemically rigorous or chemically exact representations. Wherever stereochemical fidelity matters, it is addressed explicitly in the discussion—because in chemistry, especially in chiral systems, intuition must always yield to structure. The earlier episodes treated chiral …

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Episode 4: Fixing the Bias: Data, Models and Generative Constraints

âť“ How do we move from recognizing chiral bias to responsibly fixing it? On Visuals and Stereochemical TruthSome illustrations in this series are generated or assisted by AI to support conceptual understanding. These visuals are intentionally simplified and should not be read as stereochemically rigorous or chemically exact representations. Wherever stereochemical fidelity matters, it is addressed explicitly in the discussion—because in chemistry, especially in chiral systems, intuition must always yield to structure. The earlier parts …

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Episode 3: When Algorithms Miss the Mirror: How Chiral Blind Spots Break the Pipeline?

“When molecules have two hands but AI only sees one.” On Visuals and Stereochemical TruthSome illustrations in this series are generated or assisted by AI to support conceptual understanding. These visuals are intentionally simplified and should not be read as stereochemically rigorous or chemically exact representations. Wherever stereochemical fidelity matters, it is addressed explicitly in the discussion—because in chemistry, especially in chiral systems, intuition must always yield to structure. The first two parts of this …

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Episode 2: Why Chirality Confuses Machines?

“AI isn’t blind—just stereo-sloppy” On Visuals and Stereochemical TruthSome illustrations in this series are generated or assisted by AI to support conceptual understanding. These visuals are intentionally simplified and should not be read as stereochemically rigorous or chemically exact representations. Wherever stereochemical fidelity matters, it is addressed explicitly in the discussion—because in chemistry, especially in chiral systems, intuition must always yield to structure. The first episode argued that many AI models in drug discovery are …

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Episode 1: The Promise and the Paradox: AI That Miss the Mirror

“When algorithms forget the mirror, molecules lose their meaning” On Visuals and Stereochemical TruthSome illustrations in this series are generated or assisted by AI to support conceptual understanding. These visuals are intentionally simplified and should not be read as stereochemically rigorous or chemically exact representations. Wherever stereochemical fidelity matters, it is addressed explicitly in the discussion—because in chemistry, especially in chiral systems, intuition must always yield to structure. Artificial intelligence is now everywhere in drug …

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đź§­ The Molecular Grammar of Medicines: Isomerism, Chirality, and Stereochemical Relationships Explained

“Where molecules speak, stereochemistry gives them meaning“ In pharmaceuticals, structure is language — and stereochemistry is its grammar. The way atoms arrange in 3D space shapes how drugs work, how they are regulated, and how safe they are. This Chiralpedia tutorial simplifies the molecular “grammar” behind drug behavior and innovation. When Structure Speaks Every drug molecule has a story written in its structure. Two compounds may share the same formula yet act entirely differently due …

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Part 10: Stereochemistry in Pharmaceutical Sciences – Current Trends and Future Directions

“Beyond today – emerging trends shaping the future of stereochemistry in pharma” Introduction The landscape of stereochemistry in pharmaceutical sciences continues to evolve with scientific and technological advances. This final part looks at emerging trends and future challenges. These include: – New developments in asymmetric catalysis, such as organocatalysts (MacMillan/List catalysts) that have expanded the toolkit for chiral synthesis, and the 2021 Nobel recognition of this field – implying more green and metal-free asymmetric processes …

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Part 9: Stereochemistry in Drug Discovery and Development

“From hit to lead to medicine – where stereochemistry shapes every stage of discovery” Introduction Stereochemistry is not only crucial in the final stages of drug production – it plays a significant role right from the discovery and lead optimization phases. In this part, we consider how medicinal chemists account for chirality when designing compounds and how structure-activity relationships (SAR) can depend on stereochemistry. We also look at how screening libraries incorporate stereochemical diversity, and …

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Part 8: Stereochemistry in Biologics and Natural Products

“Nature’s stereochemists – chirality in biologics, peptides, and natural products” Introduction Stereochemistry is inherent in biological macromolecules and natural products. This part explores chirality beyond small synthetic drugs – specifically, in biologics (peptides, proteins, nucleic acids) and in natural product-derived drugs. We examine how nature’s biosynthetic machinery imparts stereochemistry with high fidelity (e.g., enzymes produce single enantiomers of amino acids, sugars, complex polyketides). We discuss examples of drugs that are derived from natural chirality (like …

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Part 7: Analytical Techniques for Stereochemistry

“Measuring handedness – tools and techniques that bring chirality into focus” Introduction Ensuring the correct stereochemistry and measuring stereochemical purity is a crucial aspect of pharmaceutical quality control and research. This part covers the major analytical techniques used to distinguish and quantify enantiomers and diastereomers in drug substances and products. Key techniques include: We’ll discuss how these techniques are applied in practice: e.g., during process development, a chiral HPLC method is developed to monitor enantiomeric …

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